IL_8P17_176
3D structure
- PDB id
- 8P17 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UGG (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- G(4OC)CC*G(UR3)AAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4OC, UR3
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P17_176 not in the Motif Atlas
- Homologous match to IL_5J7L_059
- Geometric discrepancy: 0.1209
- The information below is about IL_5J7L_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.4
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8P17|1|2|G|1401
8P17|1|2|4OC|1402
8P17|1|2|C|1403
8P17|1|2|C|1404
*
8P17|1|2|G|1497
8P17|1|2|UR3|1498
8P17|1|2|A|1499
8P17|1|2|A|1500
8P17|1|2|C|1501
Current chains
- Chain 2
- 16S RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain 6
- Peptide chain release factor RF2
Coloring options: