IL_8P18_012

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_012 not in the Motif Atlas

Homologous match to IL_5J7L_254

Geometric discrepancy: 0.0838

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

8P18|1|1|U|293
8P18|1|1|A|294
8P18|1|1|G|295
*
8P18|1|1|C|343
8P18|1|1|A|344
8P18|1|1|A|345
8P18|1|1|A|346
8P18|1|1|A|347

Current chains

Chain 1

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24