IL_8P18_018
3D structure
- PDB id
- 8P18 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UGG (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 8P18|1|1|G|801, 8P18|1|1|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P18_018 not in the Motif Atlas
- Homologous match to IL_7RQB_018
- Geometric discrepancy: 0.0588
- The information below is about IL_7RQB_018
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.6
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
8P18|1|1|G|674
8P18|1|1|A|675
8P18|1|1|A|676
8P18|1|1|A|677
8P18|1|1|C|678
*
8P18|1|1|G|799
8P18|1|1|A|800
8P18|1|1|G|801
8P18|1|1|A|802
8P18|1|1|U|803
8P18|1|1|A|804
8P18|1|1|G|805
8P18|1|1|C|806
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
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