IL_8P18_043

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUUGG*CCAUC

Length

10 nucleotides

Bulged bases

8P18|1|1|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_043 not in the Motif Atlas

Geometric match to IL_4V9F_043

Geometric discrepancy: 0.3278

The information below is about IL_4V9F_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30542.3

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

4

Unit IDs

8P18|1|1|G|1059
8P18|1|1|U|1060
8P18|1|1|U|1061
8P18|1|1|G|1062
8P18|1|1|G|1063
*
8P18|1|1|C|1075
8P18|1|1|C|1076
8P18|1|1|A|1077
8P18|1|1|U|1078
8P18|1|1|C|1079

Current chains

Chain 1

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L11