IL_8P18_086

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AGCCU*AUGUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_086 not in the Motif Atlas

Geometric match to IL_8GLP_204

Geometric discrepancy: 0.3596

The information below is about IL_8GLP_204

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87767.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

17

Unit IDs

8P18|1|1|A|2101
8P18|1|1|G|2102
8P18|1|1|C|2103
8P18|1|1|C|2104
8P18|1|1|U|2105
*
8P18|1|1|A|2184
8P18|1|1|U|2185
8P18|1|1|G|2186
8P18|1|1|U|2187
8P18|1|1|U|2188

Current chains

Chain 1

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L9