IL_8P18_139

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CAG*CAGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_139 not in the Motif Atlas

Homologous match to IL_5J7L_021

Geometric discrepancy: 0.0864

The information below is about IL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33323.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

8P18|1|2|C|440
8P18|1|2|A|441
8P18|1|2|G|442
*
8P18|1|2|C|492
8P18|1|2|A|493
8P18|1|2|G|494
8P18|1|2|A|495
8P18|1|2|A|496
8P18|1|2|G|497

Current chains

Chain 2

16S rRNA

Nearby chains

Chain i

Small ribosomal subunit protein uS4