IL_8P18_191

3D structure

PDB id

8P18 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P18_191 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.09

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

8P18|1|1|U|1851
8P18|1|1|U|1852
8P18|1|1|A|1853
8P18|1|1|A|1854
8P18|1|1|U|1855
8P18|1|1|U|1856
8P18|1|1|G|1857
8P18|1|1|A|1858
8P18|1|1|U|1859
8P18|1|1|G|1860
*
8P18|1|1|U|1882
8P18|1|1|U|1883
8P18|1|1|G|1884
8P18|1|1|A|1885
8P18|1|1|U|1886
8P18|1|1|C|1887
8P18|1|1|G|1888
8P18|1|1|A|1889
8P18|1|1|A|1890
8P18|1|1|G|1891

Current chains

Chain 1

23S rRNA

Nearby chains