IL_8P2F_173
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- G(4OC)CC*G(UR3)AAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4OC, UR3
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2F_173 not in the Motif Atlas
- Homologous match to IL_5J7L_059
- Geometric discrepancy: 0.1051
- The information below is about IL_5J7L_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.4
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8P2F|1|a|G|1411
8P2F|1|a|4OC|1412
8P2F|1|a|C|1413
8P2F|1|a|C|1414
*
8P2F|1|a|G|1508
8P2F|1|a|UR3|1509
8P2F|1|a|A|1510
8P2F|1|a|A|1511
8P2F|1|a|C|1512
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- Elongation factor G
- Chain F
- Transfer RNA; tRNA
- Chain b
- mRNA
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