IL_8P2F_175
3D structure
- PDB id
- 8P2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 8P2F|1|a|A|1504
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2F_175 not in the Motif Atlas
- Geometric match to IL_4ZC7_002
- Geometric discrepancy: 0.2757
- The information below is about IL_4ZC7_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_43275.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
8P2F|1|a|C|1417
8P2F|1|a|A|1418
8P2F|1|a|C|1419
*
8P2F|1|a|G|1502
8P2F|1|a|A|1503
8P2F|1|a|A|1504
8P2F|1|a|G|1505
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- Elongation factor G
- Chain b
- mRNA
- Chain m
- 30S ribosomal protein S12
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