IL_8P2G_049
3D structure
- PDB id
- 8P2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.02 Å
Loop
- Sequence
- GUUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2G_049 not in the Motif Atlas
- Homologous match to IL_7RQB_050
- Geometric discrepancy: 0.0747
- The information below is about IL_7RQB_050
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.2
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
8P2G|1|A|G|1347
8P2G|1|A|U|1348
8P2G|1|A|U|1349
8P2G|1|A|U|1350
*
8P2G|1|A|A|1647
8P2G|1|A|C|1648
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein L34
- Chain W
- 50S ribosomal protein L23
Coloring options: