IL_8P2G_057

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

AUAG*UGAUU

Length

9 nucleotides

Bulged bases

8P2G|1|A|U|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2G_057 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.1259

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

8P2G|1|A|A|1481
8P2G|1|A|U|1482
8P2G|1|A|A|1483
8P2G|1|A|G|1484
*
8P2G|1|A|U|1598
8P2G|1|A|G|1599
8P2G|1|A|A|1600
8P2G|1|A|U|1601
8P2G|1|A|U|1602

Current chains

Chain A

23S ribosomal RNA

Nearby chains