IL_8P2G_058

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

8P2G|1|A|U|1568

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2G_058 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.0603

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

8P2G|1|A|U|1512
8P2G|1|A|A|1513
8P2G|1|A|A|1514
8P2G|1|A|G|1515
*
8P2G|1|A|U|1565
8P2G|1|A|G|1566
8P2G|1|A|A|1567
8P2G|1|A|U|1568
8P2G|1|A|G|1569

Current chains

Chain A

23S ribosomal RNA

Nearby chains