IL_8P2G_086

3D structure

PDB id

8P2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

ACA*UGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: ACA,UGU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2G_086 not in the Motif Atlas

Geometric match to IL_2ZNI_001

Geometric discrepancy: 0.1787

The information below is about IL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

8P2G|1|A|A|2130
8P2G|1|A|C|2131
8P2G|1|A|A|2132
*
8P2G|1|A|U|2211
8P2G|1|A|G|2212
8P2G|1|A|U|2213

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S11