IL_8P2H_055

3D structure

PDB id

8P2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

8P2H|1|A|U|1464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2H_055 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.2328

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

8P2H|1|A|C|1461
8P2H|1|A|G|1462
8P2H|1|A|A|1463
8P2H|1|A|U|1464
8P2H|1|A|G|1465
*
8P2H|1|A|C|1624
8P2H|1|A|U|1625
8P2H|1|A|A|1626
8P2H|1|A|G|1627

Current chains

Chain A

23S ribosomal RNA

Nearby chains