IL_8P2H_073

3D structure

PDB id

8P2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

UUAAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2H_073 not in the Motif Atlas

Homologous match to IL_7RQB_074

Geometric discrepancy: 0.1521

The information below is about IL_7RQB_074

Detailed Annotation

UAA/GAN with extra pair

Broad Annotation

No text annotation

Motif group

IL_90318.1

Basepair signature

cWW-tSH-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

8P2H|1|A|U|1878
8P2H|1|A|U|1879
8P2H|1|A|A|1880
8P2H|1|A|A|1881
8P2H|1|A|G|1882
*
8P2H|1|A|C|1914
8P2H|1|A|G|1915
8P2H|1|A|A|1916
8P2H|1|A|A|1917
8P2H|1|A|G|1918

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

Transfer RNA; tRNA