IL_8P2H_088
3D structure
- PDB id
- 8P2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CAG*CAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2H_088 not in the Motif Atlas
- Homologous match to IL_7RQB_088
- Geometric discrepancy: 0.187
- The information below is about IL_7RQB_088
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.7
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
8P2H|1|A|C|2324
8P2H|1|A|A|2325
8P2H|1|A|G|2326
*
8P2H|1|A|C|2344
8P2H|1|A|A|2345
8P2H|1|A|U|2346
8P2H|1|A|A|2347
8P2H|1|A|G|2348
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain J
- 50S ribosomal protein L5
- Chain R
- 50S ribosomal protein L18
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