IL_8P2K_040

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAG*UCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2K_040 not in the Motif Atlas

Geometric match to IL_3ICQ_003

Geometric discrepancy: 0.2312

The information below is about IL_3ICQ_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70707.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

70

Unit IDs

8P2K|1|A2|G|693
8P2K|1|A2|A|694
8P2K|1|A2|G|695
*
8P2K|1|A2|U|733
8P2K|1|A2|C|734
8P2K|1|A2|C|735

Current chains

Chain A2

18s rRNA

Nearby chains

Chain Ag

40S ribosomal protein S7