IL_8P2K_146

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2K_146 not in the Motif Atlas

Geometric match to IL_8C3A_070

Geometric discrepancy: 0.3786

The information below is about IL_8C3A_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

8P2K|1|B5|C|992
8P2K|1|B5|G|993
8P2K|1|B5|C|994
*
8P2K|1|B5|G|1111
8P2K|1|B5|G|1112
8P2K|1|B5|A|1113
8P2K|1|B5|G|1120

Current chains

Chain B5

28S rRNA

Nearby chains