IL_8P2K_193
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUG*CG
- Length
- 5 nucleotides
- Bulged bases
- 8P2K|1|B5|U|2023
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_193 not in the Motif Atlas
- Geometric match to IL_6CZR_156
- Geometric discrepancy: 0.2281
- The information below is about IL_6CZR_156
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
8P2K|1|B5|C|2022
8P2K|1|B5|U|2023
8P2K|1|B5|G|2024
*
8P2K|1|B5|C|2115
8P2K|1|B5|G|2116
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BC
- 60S ribosomal protein L4
- Chain BF
- Ribosomal Protein uL30
- Chain BQ
- eL18
- Chain Be
- Ribosomal protein L32
Coloring options: