IL_8P2K_302
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 8P2K|1|B7|U|84
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_302 not in the Motif Atlas
- Homologous match to IL_8C3A_149
- Geometric discrepancy: 0.0972
- The information below is about IL_8C3A_149
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
8P2K|1|B7|G|82
8P2K|1|B7|A|83
8P2K|1|B7|U|84
8P2K|1|B7|G|85
*
8P2K|1|B7|C|92
8P2K|1|B7|G|93
8P2K|1|B7|C|94
Current chains
- Chain B7
- 5S rRNA
Nearby chains
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- Ribosomal Protein uL30
- Chain BI
- 60S ribosomal protein L10
- Chain BS
- 60S ribosomal protein L18a
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