IL_8P2K_330

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

8P2K|1|B5|G|119, 8P2K|1|B5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|C|118
8P2K|1|B5|G|119
8P2K|1|B5|A|120
8P2K|1|B5|A|121
8P2K|1|B5|U|122
*
8P2K|1|B5|A|147
8P2K|1|B5|A|148
8P2K|1|B5|A|149
8P2K|1|B5|U|150
8P2K|1|B5|G|151
8P2K|1|B5|U|152
8P2K|1|B5|G|153

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B8

5.8S ribosomal RNA; 5.8S rRNA

Chain BG

60S ribosomal protein L7a

Chain BN

Ribosomal protein L15

Chain Bh

60S ribosomal protein L35