IL_8P2K_353
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- (PSU)CA(A2M)AGU*AA(PSU)GAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_353 not in the Motif Atlas
- Homologous match to IL_8P9A_316
- Geometric discrepancy: 0.2921
- The information below is about IL_8P9A_316
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65359.1
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8P2K|1|B5|PSU|3447
8P2K|1|B5|C|3448
8P2K|1|B5|A|3449
8P2K|1|B5|A2M|3450
8P2K|1|B5|A|3451
8P2K|1|B5|G|3452
8P2K|1|B5|U|3453
*
8P2K|1|B5|A|3464
8P2K|1|B5|A|3465
8P2K|1|B5|PSU|3466
8P2K|1|B5|G|3467
8P2K|1|B5|A|3468
8P2K|1|B5|A|3469
8P2K|1|B5|G|3470
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain AI
- E-site tRNA
- Chain BA
- 60S ribosomal protein L8
- Chain Bi
- 60S ribosomal protein L36
- Chain Bo
- eL42
Coloring options: