Motif IL_65359.1 Version IL_65359.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-13 | 6-9 | 7-8 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_069 | 4V9F | 0.2508 | 0 | 0 | LSU rRNA | U | 1907 | G | 1908 | A | 1909 | A | 1910 | C | 1911 | A | 1912 | C | 1913 | * | G | 1926 | A | 1927 | C | 1928 | G | 1929 | A | 1930 | A | 1931 | G | 1932 | cWW | tSH | ncWw | cWW |
| 2 | IL_8P9A_316 | 8P9A | 0.0000 | 0 | AR | LSU rRNA | U | 2211 | C | 2212 | A | 2213 | A | 2214 | A | 2215 | G | 2216 | U | 2217 | * | A | 2228 | A | 2229 | C | 2230 | C | 2231 | A | 2232 | A | 2233 | G | 2234 | cWW | tSH | cWW | cWW |
| 3 | IL_8OI5_090 | 8OI5 | 0.1043 | 0 | 1 | LSU rRNA | U | 2189 | C | 2190 | A | 2191 | A | 2192 | A | 2193 | G | 2194 | U | 2195 | * | A | 2206 | A | 2207 | C | 2208 | C | 2209 | A | 2210 | A | 2211 | G | 2212 | cWW | ntSH | cWW | cWW |
| 4 | IL_8GLP_306 | 8GLP | 0.2789 | 0 | L5 | LSU rRNA | PSU | 3715 | C | 3716 | A | 3717 | A2M | 3718 | A | 3719 | G | 3720 | U | 3721 | * | A | 3732 | A | 3733 | PSU | 3734 | G | 3735 | A | 3736 | A | 3737 | G | 3738 | cWW | tSH | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCAAAGU*AACCAAG | 2 |
| UGAACAC*GACGAAG | 1 |
| (PSU)CA(A2M)AGU*AA(PSU)GAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAAAG*ACCAA | 2 |
| GAACA*ACGAA | 1 |
| CA(A2M)AG*A(PSU)GAA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Heat map statistics
- Min 0.10 | Avg 0.19 | Max 0.33
Coloring options: