IL_8P4V_167
3D structure
- PDB id
- 8P4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with HaterumaimideQ
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 8P4V|1|A|U|380
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P4V_167 not in the Motif Atlas
- Homologous match to IL_8C3A_412
- Geometric discrepancy: 0.1104
- The information below is about IL_8C3A_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49054.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8P4V|1|A|G|363
8P4V|1|A|G|364
8P4V|1|A|G|365
*
8P4V|1|A|C|376
8P4V|1|A|G|377
8P4V|1|A|A|378
8P4V|1|A|U|379
8P4V|1|A|U|380
8P4V|1|A|C|381
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4-A
- Chain K
- 40S ribosomal protein S9-A
- Chain Y
- 40S ribosomal protein S23-A
Coloring options: