IL_8P4V_210
3D structure
- PDB id
- 8P4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with HaterumaimideQ
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- UGG*UCUGUGA
- Length
- 10 nucleotides
- Bulged bases
- 8P4V|1|A|U|1432, 8P4V|1|A|G|1435
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P4V_210 not in the Motif Atlas
- Homologous match to IL_8P9A_440
- Geometric discrepancy: 0.1241
- The information below is about IL_8P9A_440
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93811.1
- Basepair signature
- cWW-tHS-L-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
8P4V|1|A|U|1276
8P4V|1|A|G|1277
8P4V|1|A|G|1278
*
8P4V|1|A|U|1430
8P4V|1|A|C|1431
8P4V|1|A|U|1432
8P4V|1|A|G|1433
8P4V|1|A|U|1434
8P4V|1|A|G|1435
8P4V|1|A|A|1436
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain E
- Small ribosomal subunit protein uS3
- Chain L
- 40S ribosomal protein S10-A
- Chain V
- Small ribosomal subunit protein uS10
- Chain e
- Small ribosomal subunit protein uS14A
- Chain i
- Suppressor protein STM1
Coloring options: