IL_8P4V_441

3D structure

PDB id

8P4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with HaterumaimideQ

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

UUGG*CGAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P4V|1|sR|U|1289
8P4V|1|sR|U|1290
8P4V|1|sR|G|1291
8P4V|1|sR|G|1292
*
8P4V|1|sR|C|1323
8P4V|1|sR|G|1324
8P4V|1|sR|A|1325
8P4V|1|sR|A|1326

Current chains

Chain sR

18S ribosomal RNA

Nearby chains

Chain c7

40S ribosomal protein S17-A

Chain s0

40S ribosomal protein S0-A

Chain s2

40S ribosomal protein S2

Chain s3

Small ribosomal subunit protein uS3