IL_8P85_294
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 8P85|1|AR|U|1629, 8P85|1|AR|U|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P85_294 not in the Motif Atlas
- Geometric match to IL_8P9A_294
- Geometric discrepancy: 0.0304
- The information below is about IL_8P9A_294
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37467.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8P85|1|AR|U|1627
8P85|1|AR|C|1628
8P85|1|AR|U|1629
8P85|1|AR|U|1630
8P85|1|AR|C|1631
*
8P85|1|AR|G|1811
8P85|1|AR|G|1812
8P85|1|AR|A|1813
8P85|1|AR|A|1814
8P85|1|AR|U|1815
8P85|1|AR|A|1816
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain DB
- 60S ribosomal protein L27-A
Coloring options: