IL_8P85_306
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 8P85|1|AR|G|2335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P85_306 not in the Motif Atlas
- Geometric match to IL_8P9A_306
- Geometric discrepancy: 0.0393
- The information below is about IL_8P9A_306
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
8P85|1|AR|A|1901
8P85|1|AR|G|1902
8P85|1|AR|U|1903
8P85|1|AR|C|1904
8P85|1|AR|G|1905
8P85|1|AR|G|1906
*
8P85|1|AR|C|2333
8P85|1|AR|U|2334
8P85|1|AR|G|2335
8P85|1|AR|U|2336
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CE
- 60S ribosomal protein L3
- Chain CX
- 60S ribosomal protein L23-A
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