IL_8P8N_137
3D structure
- PDB id
- 8P8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPL39 integrated into the yeast 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CU*AAG
- Length
- 5 nucleotides
- Bulged bases
- 8P8N|1|LE|A|64
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P8N_137 not in the Motif Atlas
- Homologous match to IL_5TBW_372
- Geometric discrepancy: 0.1008
- The information below is about IL_5TBW_372
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8P8N|1|LE|C|15
8P8N|1|LE|U|16
*
8P8N|1|LE|A|63
8P8N|1|LE|A|64
8P8N|1|LE|G|65
Current chains
- Chain LE
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- 60S ribosomal protein L5
- Chain LN
- 60S ribosomal protein L10
- Chain LO
- 60S ribosomal protein L11-A
Coloring options: