IL_8P9A_204

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AUUG*CUUGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P9A|1|A|A|1230
8P9A|1|A|U|1231
8P9A|1|A|U|1232
8P9A|1|A|G|1233
*
8P9A|1|A|C|1252
8P9A|1|A|U|1253
8P9A|1|A|U|1254
8P9A|1|A|G|1255
8P9A|1|A|A|1256
8P9A|1|A|U|1257

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

40S ribosomal protein S10-A

Chain N

40S ribosomal protein S12

Chain e

Small ribosomal subunit protein uS14A

Chain g

Ubiquitin