IL_8P9A_208
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8P9A|1|A|A|1427
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P9A_208 not in the Motif Atlas
- Homologous match to IL_8C3A_458
- Geometric discrepancy: 0.0934
- The information below is about IL_8C3A_458
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 112
Unit IDs
8P9A|1|A|C|1280
8P9A|1|A|G|1281
*
8P9A|1|A|C|1426
8P9A|1|A|A|1427
8P9A|1|A|G|1428
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- Small ribosomal subunit protein uS3
- Chain R
- 40S ribosomal protein S16-A
- Chain V
- Small ribosomal subunit protein uS10
- Chain e
- Small ribosomal subunit protein uS14A
- Chain i
- Suppressor protein STM1
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