IL_8P9A_218
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGAUA*UUCAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P9A_218 not in the Motif Atlas
- Homologous match to IL_8P9A_451
- Geometric discrepancy: 0.1031
- The information below is about IL_8P9A_451
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.2
- Basepair signature
- cWW-tSH-L-R-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
8P9A|1|A|G|1540
8P9A|1|A|G|1541
8P9A|1|A|G|1542
8P9A|1|A|A|1543
8P9A|1|A|U|1544
8P9A|1|A|A|1545
*
8P9A|1|A|U|1566
8P9A|1|A|U|1567
8P9A|1|A|C|1568
8P9A|1|A|A|1569
8P9A|1|A|A|1570
8P9A|1|A|C|1571
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain G
- 40S ribosomal protein S5
- Chain T
- 40S ribosomal protein S18-A
- Chain U
- 40S ribosomal protein S19-A
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