IL_8P9A_276

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUAAG*CUAUA

Length

10 nucleotides

Bulged bases

8P9A|1|AR|U|1331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8P9A|1|AR|U|1167
8P9A|1|AR|U|1168
8P9A|1|AR|A|1169
8P9A|1|AR|A|1170
8P9A|1|AR|G|1171
*
8P9A|1|AR|C|1328
8P9A|1|AR|U|1329
8P9A|1|AR|A|1330
8P9A|1|AR|U|1331
8P9A|1|AR|A|1332

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain AS

5S ribosomal RNA; 5S rRNA

Chain CI

60S ribosomal protein L7-A

Chain CS

60S ribosomal protein L18-A

Chain DG

60S ribosomal protein L32

Chain DH

60S ribosomal protein L33-A