IL_8P9A_404
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 8P9A|1|sR|A|579, 8P9A|1|sR|U|581, 8P9A|1|sR|U|582
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.4
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
8P9A|1|sR|G|562
8P9A|1|sR|U|563
8P9A|1|sR|G|564
8P9A|1|sR|C|565
8P9A|1|sR|C|566
8P9A|1|sR|A|567
8P9A|1|sR|G|568
*
8P9A|1|sR|C|575
8P9A|1|sR|G|576
8P9A|1|sR|G|577
8P9A|1|sR|U|578
8P9A|1|sR|A|579
8P9A|1|sR|A|580
8P9A|1|sR|U|581
8P9A|1|sR|U|582
8P9A|1|sR|C|583
Current chains
- Chain sR
- 16S ribosomal RNA
Nearby chains
- Chain d3
- 40S ribosomal protein S23-A
- Chain e0
- 40S ribosomal protein S30-A
- Chain s3
- Small ribosomal subunit protein uS3
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