IL_8PEG_090

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GUG,CAC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8PEG_090 not in the Motif Atlas

Geometric match to IL_6RTI_005

Geometric discrepancy: 0.3852

The information below is about IL_6RTI_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38565.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

8PEG|1|7|G|2121
8PEG|1|7|U|2122
8PEG|1|7|G|2123
*
8PEG|1|7|C|2175
8PEG|1|7|A|2176
8PEG|1|7|C|2177

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain X

Transfer RNA; tRNA

Chain a

Large ribosomal subunit protein uL1