IL_8PEG_184

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8PEG_184 not in the Motif Atlas

Geometric match to IL_4P3U_012

Geometric discrepancy: 0.1673

The information below is about IL_4P3U_012

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

8PEG|1|Y|G|49
8PEG|1|Y|G|50
8PEG|1|Y|C|51
*
8PEG|1|Y|G|63
8PEG|1|Y|U|64
8PEG|1|Y|C|65

Current chains

Chain Y

tRNA-Val (A-site)

Nearby chains

Chain 7

Large subunit ribosomal RNA; LSU rRNA

Chain h

50S ribosomal protein L16