IL_8PEG_189

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGCCU*AUGUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8PEG_189 not in the Motif Atlas

Geometric match to IL_8S95_002

Geometric discrepancy: 0.3462

The information below is about IL_8S95_002

Detailed Annotation

Triple non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71154.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

8PEG|1|7|A|2101
8PEG|1|7|G|2102
8PEG|1|7|C|2103
8PEG|1|7|C|2104
8PEG|1|7|U|2105
*
8PEG|1|7|A|2184
8PEG|1|7|U|2185
8PEG|1|7|G|2186
8PEG|1|7|U|2187
8PEG|1|7|U|2188

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain a

Large ribosomal subunit protein uL1