IL_8PFR_070
3D structure
- PDB id
- 8PFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPL39L integrated into the yeast 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 8PFR|1|A|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PFR_070 not in the Motif Atlas
- Homologous match to IL_5TBW_071
- Geometric discrepancy: 0.0636
- The information below is about IL_5TBW_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8PFR|1|A|U|1694
8PFR|1|A|U|1695
8PFR|1|A|A|1696
8PFR|1|A|A|1697
8PFR|1|A|C|1698
*
8PFR|1|A|G|1747
8PFR|1|A|G|1748
8PFR|1|A|A|1749
8PFR|1|A|A|1750
8PFR|1|A|G|1751
8PFR|1|A|A|1752
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain RG
- 60S ribosomal protein L34-A
- Chain RM
- 60S ribosomal protein L38
Coloring options: