IL_8PHJ_145

3D structure

PDB id

8PHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

cA4-bound Cami1 in complex with 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

CCUU*AAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8PHJ_145 not in the Motif Atlas

Homologous match to IL_5J7L_327

Geometric discrepancy: 0.1837

The information below is about IL_5J7L_327

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_43644.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

2

Unit IDs

8PHJ|1|a|C|2103
8PHJ|1|a|C|2104
8PHJ|1|a|U|2105
8PHJ|1|a|U|2106
*
8PHJ|1|a|A|2183
8PHJ|1|a|A|2184
8PHJ|1|a|U|2185
8PHJ|1|a|G|2186

Current chains

Chain a

23S rRNA (2862-MER)

Nearby chains