IL_8PK0_002
3D structure
- PDB id
- 8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 8PK0|1|A|C|1769
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PK0_002 not in the Motif Atlas
- Homologous match to IL_7A0S_002
- Geometric discrepancy: 0.136
- The information below is about IL_7A0S_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 134
Unit IDs
8PK0|1|A|C|1682
8PK0|1|A|C|1683
*
8PK0|1|A|G|1768
8PK0|1|A|C|1769
8PK0|1|A|G|1770
Current chains
- Chain A
- 16S rRNA + pre-H68-71 segment
Nearby chains
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: