IL_8PK0_018
3D structure
- PDB id
- 8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GUAG*CACC
- Length
- 8 nucleotides
- Bulged bases
- 8PK0|1|A|U|2171, 8PK0|1|A|A|2172
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PK0_018 not in the Motif Atlas
- Homologous match to IL_5J7L_285
- Geometric discrepancy: 0.4462
- The information below is about IL_5J7L_285
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_92446.2
- Basepair signature
- cWW-cWW-R-L-L
- Number of instances in this motif group
- 5
Unit IDs
8PK0|1|A|G|2170
8PK0|1|A|U|2171
8PK0|1|A|A|2172
8PK0|1|A|G|2173
*
8PK0|1|A|C|2187
8PK0|1|A|A|2188
8PK0|1|A|C|2189
8PK0|1|A|C|2190
Current chains
- Chain A
- 16S rRNA + pre-H68-71 segment
Nearby chains
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: