IL_8PKL_004
3D structure
- PDB id
- 8PKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 8PKL|1|7|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PKL_004 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.0839
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
8PKL|1|7|G|81
8PKL|1|7|U|82
8PKL|1|7|A|83
8PKL|1|7|A|84
8PKL|1|7|G|85
*
8PKL|1|7|C|97
8PKL|1|7|G|98
8PKL|1|7|U|99
8PKL|1|7|U|100
8PKL|1|7|A|101
8PKL|1|7|U|102
8PKL|1|7|A|103
8PKL|1|7|A|104
8PKL|1|7|C|105
Current chains
- Chain 7
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L29
- Chain x
- 50S ribosomal protein L24
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