IL_8PKL_091

3D structure

PDB id

8PKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

8PKL|1|7|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8PKL_091 not in the Motif Atlas

Geometric match to IL_8CRE_056

Geometric discrepancy: 0.3973

The information below is about IL_8CRE_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

8PKL|1|7|U|2401
8PKL|1|7|U|2402
8PKL|1|7|C|2403
*
8PKL|1|7|G|2414
8PKL|1|7|G|2415

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L35

Chain g

50S ribosomal protein L33

Chain o

50S ribosomal protein L15