IL_8PKL_136

3D structure

PDB id

8PKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UGAAGAAGGC*GUUGUAAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PKL|1|A|U|409
8PKL|1|A|G|410
8PKL|1|A|A|411
8PKL|1|A|A|412
8PKL|1|A|G|413
8PKL|1|A|A|414
8PKL|1|A|A|415
8PKL|1|A|G|416
8PKL|1|A|G|417
8PKL|1|A|C|418
*
8PKL|1|A|G|425
8PKL|1|A|U|426
8PKL|1|A|U|427
8PKL|1|A|G|428
8PKL|1|A|U|429
8PKL|1|A|A|430
8PKL|1|A|A|431
8PKL|1|A|A|432
8PKL|1|A|G|433

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4