IL_8PKL_186
3D structure
- PDB id
- 8PKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- GGG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PKL_186 not in the Motif Atlas
- Homologous match to IL_4V9K_064
- Geometric discrepancy: 0.2496
- The information below is about IL_4V9K_064
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
8PKL|1|W|G|49
8PKL|1|W|G|50
8PKL|1|W|G|51
*
8PKL|1|W|C|63
8PKL|1|W|U|64
8PKL|1|W|C|65
Current chains
- Chain W
- tRNA-Trp (P-site)
Nearby chains
- Chain 7
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- Transfer RNA; tRNA
- Chain h
- 50S ribosomal protein L16
- Chain z
- 50S ribosomal protein L27
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