IL_8PKL_199

3D structure

PDB id

8PKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GAAGUU*AAUGUGCCUUCGGGAAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PKL|1|A|G|1003
8PKL|1|A|A|1004
8PKL|1|A|A|1005
8PKL|1|A|G|1006
8PKL|1|A|U|1007
8PKL|1|A|U|1008
*
8PKL|1|A|A|1021
8PKL|1|A|A|1022
8PKL|1|A|U|1023
8PKL|1|A|G|1024
8PKL|1|A|U|1025
8PKL|1|A|G|1026
8PKL|1|A|C|1027
8PKL|1|A|C|1028
8PKL|1|A|U|1029
8PKL|1|A|U|1030
8PKL|1|A|C|1031
8PKL|1|A|G|1032
8PKL|1|A|G|1033
8PKL|1|A|G|1034
8PKL|1|A|A|1035
8PKL|1|A|A|1036
8PKL|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14