IL_8PNN_002
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUC*GU
- Length
- 5 nucleotides
- Bulged bases
- 8PNN|1|1|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PNN_002 not in the Motif Atlas
- Homologous match to IL_8CRE_003
- Geometric discrepancy: 0.0956
- The information below is about IL_8CRE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
8PNN|1|1|A|13
8PNN|1|1|U|14
8PNN|1|1|C|15
*
8PNN|1|4|G|144
8PNN|1|4|U|145
Current chains
- Chain 1
- 25S ribosomal RNA
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 8
- 60S ribosomal protein L25
- Chain p
- 60S ribosomal protein L8-A
- Chain v
- 60S ribosomal protein L15-A
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