IL_8PNN_003
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PNN_003 not in the Motif Atlas
- Homologous match to IL_8CRE_004
- Geometric discrepancy: 0.1055
- The information below is about IL_8CRE_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
8PNN|1|1|C|27
8PNN|1|1|C|28
*
8PNN|1|1|G|56
8PNN|1|1|A|57
8PNN|1|1|G|58
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AI
- 60S ribosomal protein L35-A
- Chain AK
- 60S ribosomal protein L37-A
- Chain t
- 60S ribosomal protein L13-A
- Chain v
- 60S ribosomal protein L15-A
Coloring options: