IL_8PNN_298
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 8PNN|1|AR|U|1629, 8PNN|1|AR|U|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PNN_298 not in the Motif Atlas
- Homologous match to IL_8P9A_294
- Geometric discrepancy: 0.0695
- The information below is about IL_8P9A_294
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_56317.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8PNN|1|AR|U|1627
8PNN|1|AR|C|1628
8PNN|1|AR|U|1629
8PNN|1|AR|U|1630
8PNN|1|AR|C|1631
*
8PNN|1|AR|G|1811
8PNN|1|AR|G|1812
8PNN|1|AR|A|1813
8PNN|1|AR|A|1814
8PNN|1|AR|U|1815
8PNN|1|AR|A|1816
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain DB
- 60S ribosomal protein L27-A
Coloring options: