IL_8PV4_037

3D structure

PDB id

8PV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACCUUC*GUAUC

Length

12 nucleotides

Bulged bases

8PV4|1|C1|A|1086

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PV4|1|C1|G|958
8PV4|1|C1|A|959
8PV4|1|C1|C|960
8PV4|1|C1|C|961
8PV4|1|C1|U|962
8PV4|1|C1|U|963
8PV4|1|C1|C|964
*
8PV4|1|C1|G|1084
8PV4|1|C1|U|1085
8PV4|1|C1|A|1086
8PV4|1|C1|U|1087
8PV4|1|C1|C|1088

Current chains

Chain C1

26S rRNA

Nearby chains

Chain LF

60S ribosomal protein l7-like protein

Chain LQ

Ribosomal protein L18-like protein